Insertion junction: CLIP2.042859_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.042859
Chromosome:chromosome 4
Location:3986544
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00242258

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGCACGCACCTGAGCCCCATCGTGTCATTCCGCTGCCGTTCTCTGCCA
Internal bar code:ACGTCTTGGTCATTATTATCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1655
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCGCCACTCATACACTG
Suggested primer 2:GTCCAGGCAGGTCGTTAACA