Insertion junction: CLIP2.042859_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042859
Chromosome:chromosome 4
Location:3986544
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00242258

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTATATAAGTGTGTTAACAGGCGACAAGGAGGTTTCTTATGGATGTTTC
Internal bar code:TGGCGAAGTGAAGCTGGATGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1392
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCAGGCAGGTCGTTAACA
Suggested primer 2:ACACCGCCACTCATACACTG