Insertion junction: CLIP2.042865_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.042865
Chromosome:chromosome 5
Location:3471991
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g233400 (1 of 52) 2.7.11.22 - Cyclin-dependent kinase / Cdk-activating protein kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACTCCTAAAACCCCGCAGCCATCAGCAGCCGTAATTGCTTCGACCGA
Internal bar code:ATCTCTCCGGGTATGGCCCAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:5234
LEAP-Seq percent confirming:96.4912
LEAP-Seq n confirming:110
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:114

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAGCAGGTTAGTCACTGA
Suggested primer 2:TCTCCTGACGCTGTTCCCTA