Insertion junction: CLIP2.042865_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.042865
Chromosome:chromosome 5
Location:3471991
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g233400 (1 of 52) 2.7.11.22 - Cyclin-dependent kinase / Cdk-activating protein kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGGAGTCGTGGCGTCAAACACCGATGCCCCCACGTCAGATAGAGTAAA
Internal bar code:ATCTCTCCGGGTATGGCCCAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1908
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCCTGACGCTGTTCCCTA
Suggested primer 2:CGCAGCAGGTTAGTCACTGA