Insertion junction: CLIP2.042867_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.042867
Chromosome:chromosome 13
Location:4653699
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g603900 TSF1 (1 of 1) K01890 - phenylalanyl-tRNA synthetase beta chain (FARSB, pheT); Phenylalanyl-tRNA synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGATCTCCCCGCCATCGCGCCCCACCGCGCCTCACAAACCCAACCACCAA
Internal bar code:GAAGCTACAAAAGTATGAAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:214
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAGCTCCTTGGCGTTGAA
Suggested primer 2:GCTTCTTGTAACCCCTCCCC