Insertion junction: CLIP2.042875_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.042875
Chromosome:chromosome 3
Location:2355928
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g158300 PTK7 (1 of 112) 2.7.11.25 - Mitogen-activated protein kinase kinase kinase / MLTK; Putative tyrosine kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATGTGTGTCGTGTTCGGCATCTGCCTGAGCCCAGCTTCACCCGGCGGT
Internal bar code:ACACTTAGATTTGATATCATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2861
LEAP-Seq percent confirming:92.2078
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCCAAAGCGGAAGAGAAC
Suggested primer 2:GAGACAAGGCCTGGCTACTG