Insertion junction: CLIP2.042876_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.042876
Chromosome:chromosome 2
Location:1347460
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g082825 TSS1,SERRS1 Seryl tRNA(Sec) synthetase; (1 of 1) PTHR11778:SF0 - SERINE--TRNA LIGASE, MITOCHONDRIAL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCATTCCGGGTGGCTGTCCCTCCTCCCCCCGGTGCACTGGAGGTCGTG
Internal bar code:CGCAGCGAGTAGGCAGAACGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:262
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCCGACATGTTCACAGAG
Suggested primer 2:TCAAACGGAATCTCCCAGGC