Insertion junction: CLIP2.042878_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.042878
Chromosome:chromosome 9
Location:147399
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g386731 (1 of 2) K13095 - splicing factor 1 (SF1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGTCCGGCAACACCGTGCGGCAGCACCCAAGCCAGGCACCCCAGACAC
Internal bar code:GGCATCCAGGGACATCATCCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1134
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGGGGTGGAGTTCATTA
Suggested primer 2:TCCCTTGCAATACCACGGTC