Insertion junction: CLIP2.042883_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.042883
Chromosome:chromosome 3
Location:3366474
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g166350 (1 of 1) IPR017849//IPR017850 - Alkaline phosphatase-like, alpha/beta/alpha // Alkaline-phosphatase-like, core domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCAAGGCCAAGCTGAGTGAGCACGGCGGCTTCTCCGCCTTTGACGACC
Internal bar code:GTTGATGTGCTAGCTGCTCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4259
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GATAGTCGCCTTCATCGCCA
Suggested primer 2:TTCCCTCTCCTTGCATGCAG