Insertion junction: CLIP2.042889_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042889
Chromosome:chromosome 17
Location:1651960
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g707800 SNRK2J (1 of 4) PTHR24343//PTHR24343:SF167 - SERINE/THREONINE KINASE // SUBFAMILY NOT NAMED; snRK1 family in Chlamydomonas, subgroup 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACACTTGCCCGCCCTCCCGTCCTCTTGTCCGCCCGCTCAACTGCATTTG
Internal bar code:GGTGGTGTCGAGTAGGAACGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1461
LEAP-Seq percent confirming:93.1034
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCTGCTTCTTGAACTCCT
Suggested primer 2:CACGGCATACAACTGCATCG