Insertion junction: CLIP2.042890_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.042890
Chromosome:chromosome 6
Location:7379748
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g300100 PIA1,PIG-L (1 of 1) 3.5.1.89 - N-acetylglucosaminylphosphatidylinositol deacetylase / N-acetylglucosaminylphosphatidylinositol de-N-acetylase; N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAACCGGAGAGGAACCTGCTTGCAGTCGCCGACACACGCACCCTTGCCC
Internal bar code:GATATTTCTTGCAGACACCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1267
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGTGTACACAGCCTCCGT
Suggested primer 2:CCCCGACAGATTACGCTACC