Insertion junction: CLIP2.042895_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042895
Chromosome:chromosome 4
Location:3969234
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g231614 (1 of 1) IPR001611//IPR003591//IPR023353 - Leucine-rich repeat // Leucine-rich repeat, typical subtype // LemA-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACAGTGTGTGTTGGGCGGGGCGAATGTGCCGTGGCGCAGCAACTGGGG
Internal bar code:TCTTCTGACTGGGGATTAGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1421
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GGGACGAGAGCACAAGTGAA
Suggested primer 2:TTGCAACCTCCAGAACCTCC