Insertion junction: CLIP2.042895_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.042895
Chromosome:chromosome 4
Location:3969242
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g231614 (1 of 1) IPR001611//IPR003591//IPR023353 - Leucine-rich repeat // Leucine-rich repeat, typical subtype // LemA-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTGTCCTGCGTGTTTCCGTGACCTCTCAGACACACACAAGCACAGGCA
Internal bar code:TCTTCTGACTGGGGATTAGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:446
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCAACCTCCAGAACCTCC
Suggested primer 2:GGGACGAGAGCACAAGTGAA