Insertion junction: CLIP2.042896_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.042896
Chromosome:chromosome 7
Location:3701456
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g337750 EBM5 (1 of 3) PTHR31451//PTHR31451:SF1 - FAMILY NOT NAMED // MANNAN ENDO-1,4-BETA-MANNOSIDASE 2-RELATED; Mannan endo-1%252C4-beta-mannosidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTGAGTCCCTGAAACCCGCGGTGCCGTACCAGCACCCAGAGCTAACCC
Internal bar code:GGCACGGGGGAGGGGCGTCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3135
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGAGGTTTTGGGTTTGGC
Suggested primer 2:CGGTATGCAAATGCGTTCGT