Insertion junction: CLIP2.042899_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.042899
Chromosome:chromosome 4
Location:1480833
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g213904 Mitogen-Activated Protein Kinase 3; (1 of 1) K02208 - cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] (CDK8_11) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGACCAGTAGCCGGGTGGTTGAATCTTCGGAGGGCACCGCAGATTGGCT
Internal bar code:TATCAAGAAATAGTCGAAACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1317
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCAGCAGCATGATTTCGC
Suggested primer 2:CAAAACCAGACTGCAGCCAC