Insertion junction: CLIP2.042907_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.042907
Chromosome:chromosome 5
Location:3564274
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g233850 (1 of 3) IPR007751//IPR029058 - Domain of unknown function DUF676, lipase-like // Alpha/Beta hydrolase fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCAGCATTCGTTCAGGCGAAGACCCTCGACAGTCTGACTAGCCTCGCT
Internal bar code:ATGGTTTAACCTCCCTAACGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1605
LEAP-Seq percent confirming:53.3333
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCTTTGCCGCTTACTCCT
Suggested primer 2:GTTCAGAGACCTGGCTCACC