Insertion junction: CLIP2.042908_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042908
Chromosome:chromosome 1
Location:4483856
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g030650 PHR5,CRY-DASH2,DCRY2 (1 of 3) K01669 - deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] (phrB); DASH-type Cryptochrome 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTACAGCGCCGTCACGGAACCCGGGATCTCACCCCACAGCGAATCCAT
Internal bar code:CAATGCGGGTAGGTGCGCATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1048
LEAP-Seq percent confirming:5.71429
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:66
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:GCATCGTGACGGGATGAGAT
Suggested primer 2:CACTGCCTGAGCTCTGTGAA