Insertion junction: CLIP2.042919_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.042919
Chromosome:chromosome 6
Location:6335559
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800716 (1 of 1) K14015 - nuclear protein localization protein 4 homolog (NPLOC4, NPL4) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTAACCCGCACATGCACACGCCGCGTGAAGCCGCCGGCCCACAACCCC
Internal bar code:CAGAAGAAACCTTTCTCCTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:173
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCCCATTCCCTTGCATCA
Suggested primer 2:CCTGTCGCTCGAAGGAGTAC