Insertion junction: CLIP2.042923_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.042923
Chromosome:chromosome 3
Location:119464
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g143827 FBB7 Flagellar/basal body protein 7; (1 of 1) IPR001680//IPR011047//IPR011048//IPR017986 - WD40 repeat // Quinonprotein alcohol dehydrogenase-like superfamily // Cytochrome cd1-nitrite reductase-like, haem d1 domain // WD40-repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCATGTTGGCCACGTATAAGTCACCGCCCGCAGTCACTGCCGCCACCT
Internal bar code:ATTTGCGTCTCAGGGAGATCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2134
LEAP-Seq percent confirming:96.5517
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCTCACAGTCAGCAGATG
Suggested primer 2:CGACCTTATCGTACAGCCCC