Insertion junction: CLIP2.042924_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.042924
Chromosome:chromosome 17
Location:3792981
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g726950 (1 of 1) PTHR11042//PTHR11042:SF102 - EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED // INTERFERON-INDUCED, DOUBLE-STRANDED RNA-ACTIVATED PROTEIN KINASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAACCAACGTGCAGGAAGCGGCGGCGGCGGGGTTGGCGTTGGTGCGCC
Internal bar code:GTGGTTGATTTCGTGATGGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1512
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGTGCTCCATGTAGCTAT
Suggested primer 2:ACGCTTCCTCCTTGTCCTTG