Insertion junction: CLIP2.042927_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.042927
Chromosome:chromosome 3
Location:5606696
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g185750 (1 of 1) IPR003613//IPR013083 - U box domain // Zinc finger, RING/FYVE/PHD-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGAGGAGCTGGAGCCCGATGACAACGGCCACTATGCCTACGCGCCGG
Internal bar code:TTCATTGAGACTTTCACTTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1409
LEAP-Seq percent confirming:81.9444
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAATGTCCGCACTCACTG
Suggested primer 2:CCCCTTCCTTTCCAGCTGAG