Insertion junction: CLIP2.042927_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042927
Chromosome:chromosome 3
Location:5606698
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g185750 (1 of 1) IPR003613//IPR013083 - U box domain // Zinc finger, RING/FYVE/PHD-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGGCAGGAACTCCAGCTCTGCAGTCCAGACCCCGAAGAGGGGTATGA
Internal bar code:GAGCTTTCTGTGATCGAGGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3303
LEAP-Seq percent confirming:84.375
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTTCCTTTCCAGCTGAG
Suggested primer 2:GCAAATGTCCGCACTCACTG