Insertion junction: CLIP2.042931_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.042931
Chromosome:chromosome 13
Location:3335150
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g586350 (1 of 1) PTHR10992//PTHR10992:SF754 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN // DNA PHOTOLYASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTAAGGGGACAGGGTGTATCGTTCGATTGTCATGGCGGGTGTTGATGA
Internal bar code:ACACATATTTGTAGTATCAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:2064
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:125
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:125

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGGTCGTATGGGTGTACG
Suggested primer 2:TCCGTCTGCAGCCTTTAGTG