Insertion junction: CLIP2.042931_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.042931
Chromosome:chromosome 13
Location:3335171
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g586350 (1 of 1) PTHR10992//PTHR10992:SF754 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN // DNA PHOTOLYASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTCTAACTGTCCTCCACTTTCCCCTCATCCACCCCTCACCCGCGCTGT
Internal bar code:GAACCTAGGCATTAGGACTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1071
LEAP-Seq percent confirming:82.5
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGTCTGCAGCCTTTAGTG
Suggested primer 2:CGAGGTCGTATGGGTGTACG