Insertion junction: CLIP2.042935_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.042935
Chromosome:chromosome 11
Location:1705359
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g468200 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCTATCCATACCGCTGCTGCTTCTAGCGGCGCGGGCAGCGGGTTGGGC
Internal bar code:CGAGGAAGCTCTCGCTGCGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:397
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGACGGAAGATGCCCACT
Suggested primer 2:CAACTTTTGGCAGCAGGTCC