Insertion junction: CLIP2.042936_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.042936
Chromosome:chromosome 4
Location:2354814
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g221050 (1 of 3) PTHR12136//PTHR12136:SF47 - STEROIDOGENIC ACUTE REGULATORY PROTEIN STAR // STEROIDOGENIC ACUTE REGULATORY-LIKE PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCATACGCGCTACCAGTCCCACCAGTCCACCACACATACGGCATACCC
Internal bar code:CACTTTTTCGCAACAGAGAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:200
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTGGTCACATGCATCATG
Suggested primer 2:GGATGATTGGGGTTGCTGGA