Insertion junction: CLIP2.042938_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042938
Chromosome:chromosome 5
Location:156570
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g242500 PF1,RSP4 (1 of 2) PF04712 - Radial spokehead-like protein (Radial_spoke); Radial spoke protein 4 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCGGCTTGCCGTGGTGCGGCTCACGTGCAGGGACCCGGAGCTCCCCAT
Internal bar code:TCACTTTGAGTTAGGCGTCAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3360
LEAP-Seq percent confirming:94.9367
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTGAAGGCCACCTCGAAC
Suggested primer 2:GACCTCCTGGAGACATCCCT