Insertion junction: CLIP2.042946_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.042946
Chromosome:chromosome 2
Location:6118541
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g119651 (1 of 4) 2.4.1.229 - [Skp1-protein]-hydroxyproline N-acetylglucosaminyltransferase / transferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCCCCTGCCTGCTGACGGCTGTGTTGTTGCCGCCGCGCATGTGCGGCC
Internal bar code:AATAGGGACGAGGGGTTCTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1724
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:ACTAAACCAAGCGGAAGGGG
Suggested primer 2:AGACCAGGAGCAATGACAGC