Insertion junction: CLIP2.042946_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.042946
Chromosome:chromosome 2
Location:6118550
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g119651 (1 of 4) 2.4.1.229 - [Skp1-protein]-hydroxyproline N-acetylglucosaminyltransferase / transferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACAGCAGGGCAAACACGGCGCGCATTGCCTGGCTCGCCAAGTCTCGAT
Internal bar code:CAAACGGGATTACTTTACAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2658
LEAP-Seq percent confirming:98.1132
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:AGACCAGGAGCAATGACAGC
Suggested primer 2:ACTAAACCAAGCGGAAGGGG