Insertion junction: CLIP2.042947_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.042947
Chromosome:chromosome 3
Location:5355660
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g183200 CPC1 Central pair microtubule complex 1; (1 of 1) PTHR14919:SF0 - SPERM FLAGELLAR PROTEIN 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAACGCAGGTCTGCGCAGACTGTGGTGTGATCGGGGCGTTTAGCAAAGG
Internal bar code:CGGGTTCTGAAGACTTTAGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:4312
LEAP-Seq percent confirming:78.5714
LEAP-Seq n confirming:110
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:140

Suggested primers for confirmation by PCR

Suggested primer 1:TGAAGCCGAGATGCGCATAT
Suggested primer 2:GGAGCTGTGGTTCCAGTACC