Insertion junction: CLIP2.042948_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.042948
Chromosome:chromosome 3
Location:8968132
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g204017 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCAGCATGGAGGAGACGGCGGTGGCGAGCAGGAGCCAGGACGGCCCTG
Internal bar code:AGATAAATACCTGTGTGTGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2209
LEAP-Seq percent confirming:95.3488
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAGTCTTCCGAGCTTCTT
Suggested primer 2:GAGGTGAGGTGAGGTGGTTG