Insertion junction: CLIP2.042949_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.042949
Chromosome:chromosome 6
Location:3878186
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278186 (1 of 1) IPR000157//IPR011251//IPR016024 - Toll/interleukin-1 receptor homology (TIR) domain // Luciferase-like domain // Armadillo-type fold CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGGATGTGCGAGTGCGTGTATGTAGCACGCCACTGTTAAGTGTTTGCA
Internal bar code:CAAATGCCCTGTTGGGGACATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1123
LEAP-Seq percent confirming:21.4286
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGTCATACTTGCACACCT
Suggested primer 2:ACCTGGTGTTTGTGCTGACA