Insertion junction: CLIP2.042956_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042956
Chromosome:chromosome 1
Location:5115388
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g035750 MSC3 Mechanosensitive ion channel; (1 of 3) PTHR30566 - YNAI-RELATED MECHANOSENSITIVE ION CHANNEL CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTATTGCAGGGGGGGGTCAGGGGGCCAGCCGGCAGCAGTGAGCGTCGG
Internal bar code:TGGCAAATTCATCAGGCGCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1984
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GCCACCTGTTGCAATTCGTT
Suggested primer 2:GTTGCAGGGGAAAAACCGTC