Insertion junction: CLIP2.042958_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.042958
Chromosome:chromosome 6
Location:6172236
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g291900 PHD1 (1 of 1) PTHR21148//PTHR21148:SF1 - PHOSDUCIN-RELATED // PHOSDUCIN-LIKE PROTEIN 3; Phosducin-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTATGGAAACAGTGTTTAGGGCAACGGAGCTGCGCGCATGTGTGTGTGTG
Internal bar code:TAAGCAGTTACATTGTAATTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1117
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCGAAATCGGAGCTCTCA
Suggested primer 2:ATAGCATACTCCGCACTGCC