Insertion junction: CLIP2.042975_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.042975
Chromosome:chromosome 17
Location:1709633
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g708300 RPN12 (1 of 1) K03031 - 26S proteasome regulatory subunit N12 (PSMD8, RPN12); 26S proteasome regulatory subunit intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGGATCCGGTATCGGGCCTTTCGACGCTGGTCGGATGGTGGTAGGTTG
Internal bar code:AAACAATTGAGATAGTTGTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1222
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AACAAGTCTTCGACGCCCAT
Suggested primer 2:AGTTACGTGTCCGGTGCATT