Insertion junction: CLIP2.042979_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.042979
Chromosome:chromosome 7
Location:3391880
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g335200 GBA1,EFG12 (1 of 1) PTHR23115//PTHR23115:SF165 - TRANSLATION FACTOR // TYPA-LIKE TRANSLATION ELONGATION FACTOR SVR3-RELATED; Putative chloroplast TypA translation elongation GTPase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGGCTTCCCCGGCGCCGCTGACTTCATTGTCGGCAAGCACAAGCACCG
Internal bar code:ATCTTGGTAGCCATCCCTACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3363
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCAGACCATCTCGATCTG
Suggested primer 2:ACCAAGCCACCTTAGTCACG