Insertion junction: CLIP2.042985_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042985
Chromosome:chromosome 2
Location:442555
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g076000 LAT3,STK1,STPK1,SNRK2K (1 of 587) 2.7.11.1 - Non-specific serine/threonine protein kinase / Threonine-specific protein kinase; snRK1 family in Chlamydomonas, subgroup 2; Latrunculin-B sensitive 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGCGGGCTATGGCCTGCTTAGGCTCGGGCCAGAACAGCCGTGCCCAGC
Internal bar code:TCTGGTGTTGGCGATGTAAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:613
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGAGTGAGTACGGTGTGC
Suggested primer 2:ATGAAAGCGCCAGAAGCTCT