Insertion junction: CLIP2.042993_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.042993
Chromosome:chromosome 2
Location:2231886
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g089850 (1 of 1) IPR000969//IPR013719 - Structure-specific recognition protein // Domain of unknown function DUF1747 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGATGGAAGGGATGGCGGCACCCGAAGTTGCACGAGTCAGCAGGTGTAT
Internal bar code:CATCGTCGTTATTGGGTTGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:757
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCACACACACACACATGC
Suggested primer 2:AACCAAGCGAAACTAGCGGA