Insertion junction: CLIP2.042998_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.042998
Chromosome:chromosome 7
Location:3986806
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g339900 MAPKKK5 Mitogen-Activated Protein Kinase Kinase Kinase; (1 of 18) 2.7.10.2//2.7.11.1 - Non-specific protein-tyrosine kinase / Cytoplasmic protein tyrosine kinase // Non-specific serine/threonine protein kinase / Threonine-specific protein kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAGACGTGTTGGTGACCTCCACTGGCAAAGTCCTTGCAGTCCGTTGCG
Internal bar code:GTAGCGGGGCGAGATAGAGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:579
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGCGATAAGGATCTGCCG
Suggested primer 2:GCAAAAACCTGCGCACAAAC