Insertion junction: CLIP2.043004_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.043004
Chromosome:chromosome 12
Location:9913795
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g540076 CDC68 (1 of 1) PTHR13980:SF15 - FACT COMPLEX SUBUNIT SPT16 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACATACCAACACACGACACATACGCACACGGTGACCAAACTCCGACAC
Internal bar code:ATTGATATAGGTACAAGTGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4029
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:125
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:125

Suggested primers for confirmation by PCR

Suggested primer 1:GACATGTCCCTTTGGCTCGA
Suggested primer 2:GACCACGTCTGTAAGCCACA