Insertion junction: CLIP2.043007_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.043007
Chromosome:chromosome 11
Location:2859663
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095045 (1 of 1) PF00628//PF13871//PF13872 - PHD-finger (PHD) // C-terminal domain on Strawberry notch homologue (Helicase_C_4) // P-loop containing NTP hydrolase pore-1 (AAA_34) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCTGATGATGATGACTCTGACGAGGGCTCCTCCGACTCTGATGACGAC
Internal bar code:TAATTACTGCTCGTTATGTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1087
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GTTAGCAATGCCATCAGCCG
Suggested primer 2:ATCATCCCGACCAGATTCGC