Insertion junction: CLIP2.043009_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.043009
Chromosome:chromosome 1
Location:4908736
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g034150 (1 of 1) PTHR10110//PTHR10110:SF86 - SODIUM/HYDROGEN EXCHANGER // SODIUM/HYDROGEN EXCHANGER 7-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACAGCTTTGAGGTGTCACCGCCTCATGAGGGCACCGGGGCGTGCCGGT
Internal bar code:CGTCAGATTGTGCAAGGGCGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:318
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TACAGGGTTGGAATGCCGAC
Suggested primer 2:CGGCAGCTTGTACAGAAGGA