Insertion junction: CLIP2.043013_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.043013
Chromosome:chromosome 5
Location:994799
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g247200 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGCCGGGCGAGTGCAGGCCGCCGCCGCCGCCGCCGCCACCGCTGCCGC
Internal bar code:AAGAAATGCCCAGCCCCAGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2193
LEAP-Seq percent confirming:4.08163
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:47
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGTCCTTCCGGTGTTGAG
Suggested primer 2:TAAAACTCGACCCCACCAGC