Insertion junction: CLIP2.043019_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.043019
Chromosome:chromosome 17
Location:1797065
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g709000 (1 of 1) PTHR11319//PTHR11319:SF35 - G PROTEIN-COUPLED RECEPTOR-RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTATGCGTACGACTATTACGCGCTCCGGGTAAGGCAGGCTACGGCCCGG
Internal bar code:ACGCCTCATTATTGTGTACAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:650
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AATCCAGTCATGAGCCAGGC
Suggested primer 2:CTCTGTCCGTAACCTACCGC