Insertion junction: CLIP2.043024_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.043024
Chromosome:chromosome 3
Location:2819087
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g161950 (1 of 26) IPR011990 - Tetratricopeptide-like helical domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGAAAGGATGAACGCGCCGACAGAGCCATACTTACCTAAGACGACCTGA
Internal bar code:CCCAAGGAAGAAAGGAACTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1734
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCACTCCCTTGGACTTGGAC
Suggested primer 2:TGCCGCATAGTCACAACAGT