Insertion junction: CLIP2.043027_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.043027
Chromosome:chromosome 10
Location:2760308
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g438200 (1 of 2) IPR001841//IPR001876//IPR016024 - Zinc finger, RING-type // Zinc finger, RanBP2-type // Armadillo-type fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTCGCACGCCTCCGGGCTCTCCGCGATCACGTCGCCGTAGTTGACCAG
Internal bar code:ACGCTTTGGGGCTAAGCGTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1483
LEAP-Seq percent confirming:76.9231
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGCCCAAACTAAACCGA
Suggested primer 2:GAGGTCAGGCAGTAGCACAG