Insertion junction: CLIP2.043027_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.043027
Chromosome:chromosome 10
Location:2760311
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g438200 (1 of 2) IPR001841//IPR001876//IPR016024 - Zinc finger, RING-type // Zinc finger, RanBP2-type // Armadillo-type fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGGAGGCGCTGTGCCACTCGGTGCTGGACGACGACACAGTGCTGGAGC
Internal bar code:ACGCTTTGGGGCTAAGCGTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2901
LEAP-Seq percent confirming:65.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGTCAGGCAGTAGCACAG
Suggested primer 2:AGCAGCCCAAACTAAACCGA