Insertion junction: CLIP2.043028_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.043028
Chromosome:chromosome 4
Location:2005403
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g800465 (1 of 20) IPR001190//IPR017448 - SRCR domain // SRCR-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCTCCGTTCTTTGTGGCCGCGCTGCCGCGCTGGATTGATCGGGTGTT
Internal bar code:TTGCCTTCTGAGAAGAATTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:70
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CACTGCATGCCAAAGGTGTC
Suggested primer 2:CTAGCCCCTGTTTCTGGTGG