Insertion junction: CLIP2.043030_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.043030
Chromosome:chromosome 12
Location:5986150
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534151 EEP9 (1 of 3) PTHR22748:SF4 - DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE 2; endonuclease/exonuclease/phosphatase family protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTTACCGGGTAAGAGCTGAAGACCGCATGTGCTGGAGTGGACAGCGGG
Internal bar code:GGTCGACCGGCGGTCCCTGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:245
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AACCTCCTTCGCCTCCTTTG
Suggested primer 2:CCATGGTCTATGCAGGCACA