Insertion junction: CLIP2.043032_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.043032
Chromosome:chromosome 6
Location:6343179
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g293051 AMT1C,AMT3 Ammonium transporter; (1 of 8) K03320 - ammonium transporter, Amt family (amt, AMT, MEP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGCCCCTTCGGGGCCCACAACTGTGCACACTCCGAGCGCAGGAAACCT
Internal bar code:CTGGTTAATCTGCGTTAAGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1039
LEAP-Seq percent confirming:79.3103
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTACACGCACTTCTCCCC
Suggested primer 2:TAGCTAGTCACAGCCCCAGT